Here is a list of all class members with links to the classes they belong to:

- w -

• WAG01() : bpp::WAG01
• WARD : bpp::HierarchicalClustering
• warningLevel_ : bpp::BppOFrequencySetFormat, bpp::BppOMultiTreeReaderFormat, bpp::BppOMultiTreeWriterFormat, bpp::BppOSubstitutionModelFormat, bpp::BppOTreeReaderFormat, bpp::BppOTreeWriterFormat
• weighted_ : bpp::PGMA
• weights_ : bpp::AbstractSinglePhyloSubstitutionMapping, bpp::AbstractWeightedSubstitutionCount, bpp::BranchLikelihood, bpp::SitePatterns
• weightsHaveChanged() : bpp::AbstractWeightedSubstitutionCount, bpp::DecompositionSubstitutionCount, bpp::NaiveSubstitutionCount, bpp::UniformizationSubstitutionCount
• withFreq_ : bpp::JCprot
• within_ : bpp::CategorySubstitutionRegister
• WORD : bpp::BppOFrequencySetFormat, bpp::BppOSubstitutionModelFormat
• wordAlphabet_ : bpp::ModelList
• WordFromIndependentFrequencySet() : bpp::WordFromIndependentFrequencySet
• WordFromUniqueFrequencySet() : bpp::WordFromUniqueFrequencySet
• WordSubstitutionModel() : bpp::WordSubstitutionModel
• worksWith() : bpp::HmmPhyloAlphabet, bpp::HmmProcessAlphabet
• WrappedModelInterface() : bpp::WrappedModelInterface
• WrappedSubstitutionModelInterface() : bpp::WrappedSubstitutionModelInterface
• WrappedTransitionModelInterface() : bpp::WrappedTransitionModelInterface
• write() : bpp::BppOSubstitutionModelFormat, bpp::OSubstitutionModel
• write_() : bpp::ExtendedNewick, bpp::Newick, bpp::NexusIOTree, bpp::Nhx
• writeDiscreteDistribution() : bpp::BppORateDistributionFormat
• writeFrequencySet() : bpp::BppOFrequencySetFormat, bpp::OFrequencySet
• writeId_ : bpp::ExtendedNewick, bpp::Newick
• writeMixed_() : bpp::BppOSubstitutionModelFormat
• writePairedSiteLikelihoods() : bpp::IOTreepuzzlePairedSiteLikelihoods
• writePhyloDAG() : bpp::AbstractOPhyloDAG, bpp::ExtendedNewick, bpp::OPhyloDAG
• writePhyloDAGs() : bpp::AbstractOMultiPhyloDAG, bpp::ExtendedNewick, bpp::OMultiPhyloDAG
• writePhyloTree() : bpp::AbstractOPhyloTree, bpp::Newick, bpp::NexusIOTree, bpp::Nhx, bpp::OPhyloTree
• writePhyloTrees() : bpp::AbstractOMultiPhyloTree, bpp::Newick, bpp::NexusIOTree, bpp::Nhx, bpp::OMultiPhyloTree, bpp::PhylogeneticsApplicationTools
• writeToStream() : bpp::LegacyRewardMappingTools, bpp::LegacySubstitutionMappingTools, bpp::RewardMappingTools, bpp::SubstitutionMappingTools
• writeTree() : bpp::AbstractOTree, bpp::Newick, bpp::NexusIOTree, bpp::Nhx, bpp::OTree, bpp::PhylogeneticsApplicationTools
• writeTrees() : bpp::AbstractOMultiTree, bpp::LegacyPhylogeneticsApplicationTools, bpp::Newick, bpp::NexusIOTree, bpp::Nhx, bpp::OMultiTree