bpp-seq-omics
2.4.1
bpp::MafParser Member List
This is the complete list of members for
bpp::MafParser
, including all inherited members.
AbstractMafIterator
()
bpp::AbstractMafIterator
inline
addIterationListener
(IterationListener *listener)
bpp::AbstractMafIterator
inline
virtual
analyseCurrentBlock_
()
bpp::MafParser
private
virtual
checkSequenceSize_
bpp::MafParser
private
cmAlphabet_
bpp::MafParser
private
DOT_ASGAP
bpp::MafParser
static
DOT_ASUNRES
bpp::MafParser
static
DOT_ERROR
bpp::MafParser
static
dotOption_
bpp::MafParser
private
fireIterationMoveSignal_
(const MafBlock ¤tBlock)
bpp::AbstractMafIterator
protected
virtual
fireIterationStartSignal_
()
bpp::AbstractMafIterator
protected
virtual
fireIterationStopSignal_
()
bpp::AbstractMafIterator
protected
virtual
firstBlock_
bpp::MafParser
private
isVerbose
() const
bpp::AbstractMafIterator
inline
virtual
iterationListeners_
bpp::AbstractMafIterator
protected
MafParser
(std::istream *stream, bool parseMask=false, bool checkSize=true, short dotOption=DOT_ERROR)
bpp::MafParser
inline
MafParser
(const MafParser &maf)
bpp::MafParser
inline
private
mask_
bpp::MafParser
private
nextBlock
()
bpp::AbstractMafIterator
inline
virtual
operator=
(const MafParser &maf)
bpp::MafParser
inline
private
setVerbose
(bool yn)
bpp::AbstractMafIterator
inline
virtual
started_
bpp::AbstractMafIterator
protected
stream_
bpp::MafParser
private
verbose_
bpp::AbstractMafIterator
protected
~AbstractMafIterator
()
bpp::AbstractMafIterator
inline
virtual
~MafIterator
()
bpp::MafIterator
inline
virtual
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1.9.1