bpp::AssociationGraphImplObserver< N, E, GraphImpl > Class Template Reference

#include <Bpp/Graph/AssociationGraphImplObserver.h>

Inheritance diagram for bpp::AssociationGraphImplObserver< N, E, GraphImpl >:

Collaboration diagram for bpp::AssociationGraphImplObserver< N, E, GraphImpl >:

Classes
class	EdgeIteratorClass
class	NodeIteratorClass

Public Types
typedef AssociationGraphObserver< N, E >::NodeIndex	NodeIndex
typedef AssociationGraphObserver< N, E >::EdgeIndex	EdgeIndex
typedef Graph::NodeId	NodeGraphid
typedef Graph::EdgeId	EdgeGraphid
using	Eref = std::shared_ptr< E >
using	Nref = std::shared_ptr< N >

Public Member Functions
Graph Relations Management
Modificating the structure of the graph.
void	createNode (Nref nodeObject)
void	createNode (Nref objectOriginNode, Nref newNodeObject, Eref newEdgeObject=00)
void	link (Nref nodeObjectA, Nref nodeObjectB, Eref edgeObject=00)
void	unlink (Nref nodeObjectA, Nref nodeObjectB)
void	deleteNode (Nref nodeObject)
Object Association
Associate or dissociate N and E objects to pre-existing Graph Nodes and Graph Edges
void	associateNode (Nref nodeObject, NodeGraphid graphNode)
void	associateEdge (Eref edgeObject, EdgeGraphid graphEdge)
void	dissociateNode (Nref nodeObject)
void	dissociateEdge (Eref edgeObject)
NodeGraphid	getNodeGraphid (const Nref nodeObject) const
EdgeGraphid	getEdgeGraphid (const Eref edgeObject) const
Nref	getNodeFromGraphid (NodeGraphid node)
const Nref	getNodeFromGraphid (NodeGraphid node) const
std::vector< Nref >	getNodesFromGraphid (std::vector< NodeGraphid > nodes) const
Eref	getEdgeFromGraphid (EdgeGraphid edge)
const Eref	getEdgeFromGraphid (EdgeGraphid edge) const
std::vector< Eref >	getEdgesFromGraphid (std::vector< EdgeGraphid > edges) const
void	setRoot (const Nref newRoot)
	set the root (but no checking, to be used at first construction) More...
Nref	getRoot () const
NodeIndex	getRootIndex () const
Object Indexation
Get or set indexes to nodes and edges
bool	hasNodeIndex (const Nref nodeObject) const
	return if the object has an index. More...
bool	hasEdgeIndex (const Eref edgeObject) const
NodeIndex	getNodeIndex (const Nref nodeObject) const
std::vector< NodeIndex >	getNodeIndexes (std::vector< Nref > nodes) const
EdgeIndex	getEdgeIndex (const Eref edgeObject) const
std::vector< EdgeIndex >	getEdgeIndexes (std::vector< Eref > edges) const
NodeIndex	setNodeIndex (const Nref nodeObject, NodeIndex index)
EdgeIndex	setEdgeIndex (const Eref edgeObject, EdgeIndex index)
NodeIndex	addNodeIndex (const Nref nodeObject)
EdgeIndex	addEdgeIndex (const Eref edgeObject)
bool	hasNode (NodeIndex node) const
bool	hasEdge (EdgeIndex edge) const
Nref	getNode (NodeIndex node) const
Eref	getEdge (EdgeIndex edge) const
Topology exploration
These methodes of the graph concern the topology exploration.
void	outputToDot (const std::string &fname, const std::string &name) const
void	outputToDot (std::ostream &out, const std::string &name) const
Iterators on Nodes
std::unique_ptr< typename AssociationGraphObserver< N, E >::NodeIterator >	allNodesIterator ()
std::unique_ptr< typename AssociationGraphObserver< N, E >::NodeIterator >	allNodesIterator () const
std::unique_ptr< typename AssociationGraphObserver< N, E >::NodeIterator >	outgoingNeighborNodesIterator (Nref node)
std::unique_ptr< typename AssociationGraphObserver< N, E >::NodeIterator >	outgoingNeighborNodesIterator (Nref node) const
std::unique_ptr< typename AssociationGraphObserver< N, E >::NodeIterator >	incomingNeighborNodesIterator (Nref node)
std::unique_ptr< typename AssociationGraphObserver< N, E >::NodeIterator >	incomingNeighborNodesIterator (Nref node) const
std::vector< Nref >	getNeighbors (const Nref node) const
std::vector< NodeIndex >	getNeighbors (NodeIndex node) const
std::vector< Eref >	getEdges (const Nref node) const
std::vector< EdgeIndex >	getEdges (NodeIndex node) const
std::vector< Nref >	getOutgoingNeighbors (const Nref node) const
std::vector< NodeIndex >	getOutgoingNeighbors (NodeIndex node) const
std::vector< Eref >	getOutgoingEdges (const Nref node) const
std::vector< EdgeIndex >	getOutgoingEdges (NodeIndex node) const
std::vector< Nref >	getIncomingNeighbors (const Nref node) const
std::vector< NodeIndex >	getIncomingNeighbors (NodeIndex node) const
std::vector< Eref >	getIncomingEdges (const Nref node) const
std::vector< EdgeIndex >	getIncomingEdges (NodeIndex node) const
std::vector< Nref >	getLeavesFromNode (Nref node, unsigned int maxDepth) const
std::vector< Nref >	getAllLeaves () const
std::vector< NodeIndex >	getAllLeavesIndexes () const
std::vector< Nref >	getAllInnerNodes () const
std::vector< NodeIndex >	getAllInnerNodesIndexes () const
std::vector< Nref >	getAllNodes () const
std::vector< NodeIndex >	getAllNodesIndexes () const
std::vector< EdgeIndex >	getAllEdgesIndexes () const
std::unique_ptr< typename AssociationGraphObserver< N, E >::EdgeIterator >	allEdgesIterator ()
std::unique_ptr< typename AssociationGraphObserver< N, E >::EdgeIterator >	allEdgesIterator () const
std::unique_ptr< typename AssociationGraphObserver< N, E >::EdgeIterator >	outgoingEdgesIterator (Nref node)
std::unique_ptr< typename AssociationGraphObserver< N, E >::EdgeIterator >	outgoingEdgesIterator (Nref node) const
std::unique_ptr< typename AssociationGraphObserver< N, E >::EdgeIterator >	incomingEdgesIterator (Nref node)
std::unique_ptr< typename AssociationGraphObserver< N, E >::EdgeIterator >	incomingEdgesIterator (Nref node) const
std::vector< Eref >	getAllEdges () const
bool	isLeaf (const Nref node) const
	Is the node a leaf? More...
bool	isLeaf (const NodeIndex nodeid) const
std::pair< Nref, Nref >	getNodes (Eref edge) const
Eref	getEdgeLinking (Nref nodeA, Nref nodeB) const
void	setEdgeLinking (Nref nodeA, Nref nodeB, Eref edge)
Function called by the subjectGraph
These methodes are called by the subject graph to make this observer so fit the subject graph
void	deletedEdgesUpdate (const std::vector< unsigned int > &edgesToDelete)
void	deletedNodesUpdate (const std::vector< unsigned int > &nodesToDelete)
Object Indexation
Get or set indexes to nodes and edges
virtual std::vector< NodeIndex >	getNodeIndexes (std::vector< std::shared_ptr< N >> nodeObjects) const =0
virtual std::vector< EdgeIndex >	getEdgeIndexes (std::vector< std::shared_ptr< E >> edgeObjects) const =0

Static Public Member Functions
template<class A , class B >
static B *	copy (const A &a, typename std::enable_if< !std::is_base_of< B, A >::value &&!std::is_abstract< B >::value, B *>::type *=0)
template<class A , class B >
static B *	copy (const A &a, typename std::enable_if< !std::is_base_of< B, A >::value &&std::is_abstract< B >::value, B *>::type *=0)
template<class A , class B >
static B *	copy (const A &a, typename std::enable_if< std::is_base_of< B, A >::value &&!std::is_abstract< A >::value, B *>::type *=0)
template<class A , class B >
static B *	copy (const A &a, typename std::enable_if< std::is_base_of< B, A >::value &&std::is_abstract< A >::value &&std::is_base_of< Clonable, A >::value, B *>::type *=0)
template<class A , class B >
static B *	copy (const A &a, typename std::enable_if< std::is_base_of< B, A >::value &&std::is_abstract< A >::value &&!std::is_base_of< Clonable, A >::value, B *>::type *=0)

Protected Attributes
std::shared_ptr< GraphImpl >	subjectGraph_
enum	neighborType { INCOMING, OUTGOING, BOTH }
std::vector< Nref >	graphidToN_
std::vector< Eref >	graphidToE_
std::map< Nref, NodeGraphid >	NToGraphid_
std::map< Eref, EdgeGraphid >	EToGraphid_
std::vector< Nref >	indexToN_
std::vector< Eref >	indexToE_
std::map< Nref, NodeIndex >	NToIndex_
std::map< Eref, EdgeIndex >	EToIndex_
	AssociationGraphImplObserver (bool directed=false)
	AssociationGraphImplObserver (std::shared_ptr< GraphImpl > subjectGraph=00)
	Constructor. More...
template<class N2 , class E2 >
	AssociationGraphImplObserver (AssociationGraphImplObserver< N2, E2, GraphImpl > const &graphObserver)
	AssociationGraphImplObserver (AssociationGraphImplObserver< N, E, GraphImpl > const &graphObserver)
AssociationGraphImplObserver< N, E, GraphImpl > &	operator= (bpp::AssociationGraphImplObserver< N, E, GraphImpl > const &graphObserver)
	~AssociationGraphImplObserver ()
AssociationGraphImplObserver< N, E, GraphImpl > *	clone () const
const std::shared_ptr< GraphImpl >	getGraph () const
std::shared_ptr< GraphImpl >	getGraph ()
bool	hasNode (Nref nodeObject) const
bool	hasEdge (Eref edgeObject) const
std::string	nodeToString (const Nref nodeObject) const
std::string	edgeToString (const Eref edgeObject) const
std::vector< Nref >	getNeighbors_ (const Nref nodeObject, neighborType type) const
std::vector< Eref >	getEdges_ (const Nref nodeObject, neighborType type) const

General Info
General information about the graph
template<typename N2 , typename E2 , typename G2 >
class	AssociationGraphImplObserver
size_t	getNumberOfNodes () const
size_t	getNumberOfEdges () const
size_t	getNumberOfLeaves () const
size_t	getDegree (const Nref node) const

Detailed Description

template<class N, class E, class GraphImpl>
class bpp::AssociationGraphImplObserver< N, E, GraphImpl >

Definition at line 26 of file AssociationGraphImplObserver.h.

Member Typedef Documentation

EdgeGraphid

template<class N, class E, class GraphImpl>

typedef Graph::EdgeId bpp::AssociationGraphImplObserver< N, E, GraphImpl >::EdgeGraphid

Definition at line 33 of file AssociationGraphImplObserver.h.

EdgeIndex

template<class N, class E, class GraphImpl>

typedef AssociationGraphObserver<N, E>::EdgeIndex bpp::AssociationGraphImplObserver< N, E, GraphImpl >::EdgeIndex

Definition at line 30 of file AssociationGraphImplObserver.h.

Eref

template<class N, class E, class GraphImpl>

using bpp::AssociationGraphImplObserver< N, E, GraphImpl >::Eref = std::shared_ptr<E>

Definition at line 35 of file AssociationGraphImplObserver.h.

NodeGraphid

template<class N, class E, class GraphImpl>

typedef Graph::NodeId bpp::AssociationGraphImplObserver< N, E, GraphImpl >::NodeGraphid

Definition at line 32 of file AssociationGraphImplObserver.h.

NodeIndex

template<class N, class E, class GraphImpl>

typedef AssociationGraphObserver<N, E>::NodeIndex bpp::AssociationGraphImplObserver< N, E, GraphImpl >::NodeIndex

Definition at line 29 of file AssociationGraphImplObserver.h.

Nref

template<class N, class E, class GraphImpl>

using bpp::AssociationGraphImplObserver< N, E, GraphImpl >::Nref = std::shared_ptr<N>

Definition at line 36 of file AssociationGraphImplObserver.h.

Member Enumeration Documentation

neighborType

template<class N, class E, class GraphImpl>

enum bpp::AssociationGraphImplObserver::neighborType

private

defines a type of neighbors : incoming and/or outgoing

Enumerator
INCOMING
OUTGOING
BOTH

Definition at line 379 of file AssociationGraphImplObserver.h.

Constructor & Destructor Documentation

AssociationGraphImplObserver() [1/4]

template<class N, class E, class GraphImpl>

bpp::AssociationGraphImplObserver< N, E, GraphImpl >::AssociationGraphImplObserver ( bool  directed = false )

inline

Constructor

Parameters

directed

is the graph directed

Definition at line 115 of file AssociationGraphImplObserver.h.

AssociationGraphImplObserver() [2/4]

template<class N, class E, class GraphImpl>

bpp::AssociationGraphImplObserver< N, E, GraphImpl >::AssociationGraphImplObserver ( std::shared_ptr< GraphImpl >  subjectGraph = 00 )

inline

Constructor.

Parameters

subjectGraph

the graph which is observed. If == 00, a new Graph is built.

Definition at line 138 of file AssociationGraphImplObserver.h.

AssociationGraphImplObserver() [3/4]

template<class N, class E, class GraphImpl>

template<class N2 , class E2 >

bpp::AssociationGraphImplObserver< N, E, GraphImpl >::AssociationGraphImplObserver ( AssociationGraphImplObserver< N2, E2, GraphImpl > const &  graphObserver )

inline

Copy Constructor

Parameters

graphObserver

the graphObserver to be copied

Definition at line 158 of file AssociationGraphImplObserver.h.

AssociationGraphImplObserver() [4/4]

template<class N, class E, class GraphImpl>

bpp::AssociationGraphImplObserver< N, E, GraphImpl >::AssociationGraphImplObserver ( AssociationGraphImplObserver< N, E, GraphImpl > const &  graphObserver )

inline

Definition at line 204 of file AssociationGraphImplObserver.h.

~AssociationGraphImplObserver()

template<class N, class E, class GraphImpl>

bpp::AssociationGraphImplObserver< N, E, GraphImpl >::~AssociationGraphImplObserver ( )

inline

Destructor

Definition at line 305 of file AssociationGraphImplObserver.h.

Member Function Documentation

addEdgeIndex()

template<class N, class E, class GraphImpl>

EdgeIndex bpp::AssociationGraphImplObserver< N, E, GraphImpl >::addEdgeIndex ( const Eref  edgeObject )

inline

Add an index associated to an edge

Parameters

edgeObject

object to which one want to set the index

Returns

the given index

Definition at line 852 of file AssociationGraphImplObserver.h.

addNodeIndex()

template<class N, class E, class GraphImpl>

NodeIndex bpp::AssociationGraphImplObserver< N, E, GraphImpl >::addNodeIndex ( const Nref  nodeObject )

inline

Set an new index associated to a node

Parameters

nodeObject

object to which one want to set the index

Returns

the given index

Definition at line 821 of file AssociationGraphImplObserver.h.

allEdgesIterator() [1/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::EdgeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::allEdgesIterator ( )

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1363 of file AssociationGraphImplObserver.h.

allEdgesIterator() [2/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::EdgeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::allEdgesIterator ( ) const

inline

Definition at line 1368 of file AssociationGraphImplObserver.h.

allNodesIterator() [1/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::NodeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::allNodesIterator ( )

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1025 of file AssociationGraphImplObserver.h.

allNodesIterator() [2/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::NodeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::allNodesIterator ( ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1030 of file AssociationGraphImplObserver.h.

associateEdge()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::associateEdge ( Eref  edgeObject, EdgeGraphid  graphEdge  )

inlinevirtual

Associate a E object to an edge in the graph.

Parameters

edgeObject	object to associate
graphEdge	existing edge to be associated

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 554 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::setEdgeLinking().

associateNode()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::associateNode ( Nref  nodeObject, NodeGraphid  graphNode  )

inlinevirtual

Associate a N object to a node in the graph.

Parameters

nodeObject	object to associate
graphNode	existing node to be associated

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 534 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::createNode().

clone()

template<class N, class E, class GraphImpl>

AssociationGraphImplObserver<N, E, GraphImpl>* bpp::AssociationGraphImplObserver< N, E, GraphImpl >::clone ( ) const

inlinevirtual

clone function

Implements bpp::Clonable.

Definition at line 313 of file AssociationGraphImplObserver.h.

copy() [1/5]

template<class N, class E>

template<class A , class B >

static B* bpp::AssociationGraphObserver< N, E >::copy ( const A &  a, typename std::enable_if< !std::is_base_of< B, A >::value &&!std::is_abstract< B >::value, B *>::type *  = 0  )

inlinestaticinherited

Specific copy of A and B objects, if clonable or not.

Definition at line 45 of file AssociationGraphObserver.h.

copy() [2/5]

template<class N, class E>

template<class A , class B >

static B* bpp::AssociationGraphObserver< N, E >::copy ( const A &  a, typename std::enable_if< !std::is_base_of< B, A >::value &&std::is_abstract< B >::value, B *>::type *  = 0  )

inlinestaticinherited

Definition at line 51 of file AssociationGraphObserver.h.

copy() [3/5]

template<class N, class E>

template<class A , class B >

static B* bpp::AssociationGraphObserver< N, E >::copy ( const A &  a, typename std::enable_if< std::is_base_of< B, A >::value &&!std::is_abstract< A >::value, B *>::type *  = 0  )

inlinestaticinherited

Definition at line 58 of file AssociationGraphObserver.h.

copy() [4/5]

template<class N, class E>

template<class A , class B >

static B* bpp::AssociationGraphObserver< N, E >::copy ( const A &  a, typename std::enable_if< std::is_base_of< B, A >::value &&std::is_abstract< A >::value &&std::is_base_of< Clonable, A >::value, B *>::type *  = 0  )

inlinestaticinherited

Definition at line 64 of file AssociationGraphObserver.h.

copy() [5/5]

template<class N, class E>

template<class A , class B >

static B* bpp::AssociationGraphObserver< N, E >::copy ( const A &  a, typename std::enable_if< std::is_base_of< B, A >::value &&std::is_abstract< A >::value &&!std::is_base_of< Clonable, A >::value, B *>::type *  = 0  )

inlinestaticinherited

Definition at line 70 of file AssociationGraphObserver.h.

References bpp::AssociationGraphObserver< N, E >::associateEdge(), bpp::AssociationGraphObserver< N, E >::associateNode(), bpp::AssociationGraphObserver< N, E >::createNode(), bpp::AssociationGraphObserver< N, E >::deleteNode(), bpp::AssociationGraphObserver< N, E >::dissociateEdge(), bpp::AssociationGraphObserver< N, E >::dissociateNode(), bpp::AssociationGraphObserver< N, E >::getEdge(), bpp::AssociationGraphObserver< N, E >::getEdgeFromGraphid(), bpp::AssociationGraphObserver< N, E >::getEdgeGraphid(), bpp::AssociationGraphObserver< N, E >::getEdgeIndex(), bpp::AssociationGraphObserver< N, E >::getEdgeIndexes(), bpp::AssociationGraphObserver< N, E >::getEdgesFromGraphid(), bpp::AssociationGraphObserver< N, E >::getNode(), bpp::AssociationGraphObserver< N, E >::getNodeFromGraphid(), bpp::AssociationGraphObserver< N, E >::getNodeGraphid(), bpp::AssociationGraphObserver< N, E >::getNodeIndex(), bpp::AssociationGraphObserver< N, E >::getNodeIndexes(), bpp::AssociationGraphObserver< N, E >::getNodesFromGraphid(), bpp::AssociationGraphObserver< N, E >::getRoot(), bpp::AssociationGraphObserver< N, E >::getRootIndex(), bpp::AssociationGraphObserver< N, E >::hasEdge(), bpp::AssociationGraphObserver< N, E >::hasEdgeIndex(), bpp::AssociationGraphObserver< N, E >::hasNode(), bpp::AssociationGraphObserver< N, E >::hasNodeIndex(), bpp::AssociationGraphObserver< N, E >::link(), bpp::AssociationGraphObserver< N, E >::setEdgeIndex(), bpp::AssociationGraphObserver< N, E >::setNodeIndex(), and bpp::AssociationGraphObserver< N, E >::unlink().

createNode() [1/2]

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::createNode ( Nref  nodeObject )

inlinevirtual

Creates an orphaned node from a NodeClass object.

Parameters

nodeObject

the N object associated to the node in the graph.

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 438 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::createNode().

createNode() [2/2]

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::createNode ( Nref  objectOriginNode, Nref  newNodeObject, Eref  newEdgeObject = 00  )

inlinevirtual

Creates an node linked to an existing node. Order of parameters match the link method.

Parameters

objectOriginNode	existing node. In a directed graph: origin -> newNode.
newNodeObject	the N object associated to the node in the graph.
newEdgeObject	the optional edge between the nodes (default = 00)

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 455 of file AssociationGraphImplObserver.h.

deletedEdgesUpdate()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::deletedEdgesUpdate ( const std::vector< unsigned int > &  edgesToDelete )

inlinevirtual

Delete unused object edges, since they have been deleted in the graph

Parameters

edgesToDelete

a vector of Edges to delete

Implements bpp::GraphObserver.

Definition at line 1477 of file AssociationGraphImplObserver.h.

deletedNodesUpdate()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::deletedNodesUpdate ( const std::vector< unsigned int > &  nodesToDelete )

inlinevirtual

Delete unused object nodes, since they have been deleted in the graph

Parameters

nodesToDelete

a vector of N to delete

Implements bpp::GraphObserver.

Definition at line 1495 of file AssociationGraphImplObserver.h.

deleteNode()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::deleteNode ( Nref  nodeObject )

inlinevirtual

Deletes a node

Parameters

nodeObject

node to be deleted. The N node object given in argument is not deleted.

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 513 of file AssociationGraphImplObserver.h.

dissociateEdge()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::dissociateEdge ( Eref  edgeObject )

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 581 of file AssociationGraphImplObserver.h.

dissociateNode()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::dissociateNode ( Nref  nodeObject )

inlinevirtual

Dissociate a N or E object to a node or an edge in the graph.

Parameters

nodeObject

object to dissociate

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 573 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::deleteNode().

edgeToString()

template<class N, class E, class GraphImpl>

std::string bpp::AssociationGraphImplObserver< N, E, GraphImpl >::edgeToString ( const Eref  edgeObject ) const

inline

Definition at line 361 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::addEdgeIndex(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::associateEdge(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdgeIndex(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::link(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::setEdgeIndex().

getAllEdges()

template<class N, class E, class GraphImpl>

std::vector<Eref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getAllEdges ( ) const

inlinevirtual

Get all the defined branches of a graph,

Returns

a vector containing the branchesObjects

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1405 of file AssociationGraphImplObserver.h.

getAllEdgesIndexes()

template<class N, class E, class GraphImpl>

std::vector<EdgeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getAllEdgesIndexes ( ) const

inlinevirtual

Get indexes of all defined edges of a graph,

Returns

a vector containing the edgesObjects

They are in the same order as the graphIds (and not necessary Indexes).

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1316 of file AssociationGraphImplObserver.h.

getAllInnerNodes()

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getAllInnerNodes ( ) const

inlinevirtual

Get all the inner nodes of a graph, ie, nodes with degree >= 2.

Returns

a vector containing the inner nodes.

They are in the same order as the graphIds (and not necessary Indexes).

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1236 of file AssociationGraphImplObserver.h.

getAllInnerNodesIndexes()

template<class N, class E, class GraphImpl>

std::vector<NodeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getAllInnerNodesIndexes ( ) const

inlinevirtual

Get the indexes of all inner nodes of a graph, ie, nodes with degree >= 2.

Returns

a vector containing the inner nodes.

They are in the same order as the graphIds (and not necessary Indexes).

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1257 of file AssociationGraphImplObserver.h.

getAllLeaves()

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getAllLeaves ( ) const

inlinevirtual

Get all the leaves objects of a graph, ie, nodes with only one neighbor,

Returns

a vector containing the leaves

They are in the same order as the graphIds (and not necessary Indexes).

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1193 of file AssociationGraphImplObserver.h.

getAllLeavesIndexes()

template<class N, class E, class GraphImpl>

std::vector<NodeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getAllLeavesIndexes ( ) const

inlinevirtual

Get index of the leaves objects of a graph, ie, nodes with only one neighbor,

Returns

a vector containing the leaves

They are in the same order as the graphIds (and not necessary Indexes).

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1214 of file AssociationGraphImplObserver.h.

getAllNodes()

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getAllNodes ( ) const

inlinevirtual

Get all the defined nodes of a graph,

Returns

a vector containing the nodesObjects

They are in the same order as the graphIds (and not necessary Indexes).

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1278 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::outputToDot().

getAllNodesIndexes()

template<class N, class E, class GraphImpl>

std::vector<NodeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getAllNodesIndexes ( ) const

inlinevirtual

Get indexes of all defined nodes of a graph,

Returns

a vector containing the nodesObjects

They are in the same order as the graphIds (and not necessary Indexes).

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1297 of file AssociationGraphImplObserver.h.

getDegree()

template<class N, class E, class GraphImpl>

size_t bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getDegree ( const Nref  node ) const

inline

Return the number of neighbors of a node

Parameters

node	the concerned node

Returns

the number of neighbors

Definition at line 1559 of file AssociationGraphImplObserver.h.

getEdge()

template<class N, class E, class GraphImpl>

Eref bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdge ( EdgeIndex  edge ) const

inlinevirtual

Return the associated Node index

Parameters

edge	object which to return the node index

Returns

a node index

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 911 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdgeLinking(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::setEdgeLinking().

getEdgeFromGraphid() [1/2]

template<class N, class E, class GraphImpl>

Eref bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdgeFromGraphid ( EdgeGraphid  edge )

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 649 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdgeLinking(), bpp::AssociationGraphImplObserver< N, E, GraphImpl >::EdgeIteratorClass< GraphIterator, is_const >::next(), bpp::AssociationGraphImplObserver< N, E, GraphImpl >::EdgeIteratorClass< GraphIterator, is_const >::operator*(), and bpp::AssociationGraphImplObserver< N, E, GraphImpl >::EdgeIteratorClass< GraphIterator, is_const >::start().

getEdgeFromGraphid() [2/2]

template<class N, class E, class GraphImpl>

const Eref bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdgeFromGraphid ( EdgeGraphid  edge ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 657 of file AssociationGraphImplObserver.h.

getEdgeGraphid()

template<class N, class E, class GraphImpl>

EdgeGraphid bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdgeGraphid ( const Eref  edgeObject ) const

inlinevirtual

Return the associated Edge ID

Parameters

edgeObject

object which to return the node ID

Returns

a edge ID

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 608 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNodes().

getEdgeIndex()

template<class N, class E, class GraphImpl>

EdgeIndex bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdgeIndex ( const Eref  edgeObject ) const

inlinevirtual

Return the associated Node index

Parameters

edgeObject

object which to return the node index

Returns

a node index

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 751 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::edgeToString(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getAllEdgesIndexes(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdgeIndexes(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::outputToDot().

getEdgeIndexes() [1/2]

template<class N, class E>

virtual std::vector<EdgeIndex> bpp::AssociationGraphObserver< N, E >::getEdgeIndexes ( std::vector< std::shared_ptr< E >>  edgeObjects ) const

pure virtualinherited

Referenced by bpp::AssociationGraphObserver< N, E >::copy().

getEdgeIndexes() [2/2]

template<class N, class E, class GraphImpl>

std::vector<EdgeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdgeIndexes ( std::vector< Eref >  edges ) const

inline

Definition at line 759 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingEdges(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingEdges().

getEdgeLinking()

template<class N, class E, class GraphImpl>

Eref bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdgeLinking ( Nref  nodeA, Nref  nodeB  ) const

inlinevirtual

Returns the Edge between two nodes nodeA -> nodeB

Parameters

nodeA	source node (if directed)
nodeB	destination node (if directed)

Returns

the edge between these two nodes, or 0 if edge does not exist

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1449 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::outputToDot().

getEdges() [1/2]

template<class N, class E, class GraphImpl>

std::vector<Eref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdges ( const Nref  node ) const

inlinevirtual

Get all the edges of a node in the graph.

Parameters

node	the node one wants to get its edges

Returns

a vector containing the edges

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1096 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdges().

getEdges() [2/2]

template<class N, class E, class GraphImpl>

std::vector<EdgeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdges ( NodeIndex  node ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1101 of file AssociationGraphImplObserver.h.

getEdges_()

template<class N, class E, class GraphImpl>

std::vector<Eref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdges_ ( const Nref  nodeObject, neighborType  type  ) const

inlineprivate

Get incoming / outgoing edges according to the enum type

Definition at line 407 of file AssociationGraphImplObserver.h.

getEdgesFromGraphid()

template<class N, class E, class GraphImpl>

std::vector<Eref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getEdgesFromGraphid ( std::vector< EdgeGraphid >  edges ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 665 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationDAGraphImplObserver< N, E, DAGraphImpl >::getBelowEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdges_(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingEdges(), and bpp::AssociationTreeGraphImplObserver< N, E, TreeGraphImpl >::getSubtreeEdges().

getGraph() [1/2]

template<class N, class E, class GraphImpl>

const std::shared_ptr<GraphImpl> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getGraph ( ) const

inline

Definition at line 315 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::AssociationGraphImplObserver(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::createNode(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::deleteNode(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getAllInnerNodes(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getAllInnerNodesIndexes(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getAllLeaves(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getAllLeavesIndexes(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getDegree(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdgeLinking(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdges_(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getLeavesFromNode(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNeighbors_(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNodes(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getRoot(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getRootIndex(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::isLeaf(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::link(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::operator=(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::outputToDot(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::setEdgeLinking(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::setRoot(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::unlink(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::~AssociationGraphImplObserver().

getGraph() [2/2]

template<class N, class E, class GraphImpl>

std::shared_ptr<GraphImpl> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getGraph ( )

inline

Definition at line 320 of file AssociationGraphImplObserver.h.

getIncomingEdges() [1/2]

template<class N, class E, class GraphImpl>

std::vector<Eref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getIncomingEdges ( const Nref  node ) const

inlinevirtual

In an directed graph, get all the edges which are coming to a node in the graph.

Parameters

node	the node one wants to get its edges

Returns

a vector containing the incoming edges

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1162 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingEdges().

getIncomingEdges() [2/2]

template<class N, class E, class GraphImpl>

std::vector<EdgeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getIncomingEdges ( NodeIndex  node ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1167 of file AssociationGraphImplObserver.h.

getIncomingNeighbors() [1/2]

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getIncomingNeighbors ( const Nref  node ) const

inlinevirtual

In an directed graph, get all the neighbors which are coming to a node in the graph.

Parameters

node	the node one wants to get its neighbors

Returns

a vector containing the incoming neighbors

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1145 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingNeighbors().

getIncomingNeighbors() [2/2]

template<class N, class E, class GraphImpl>

std::vector<NodeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getIncomingNeighbors ( NodeIndex  node ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1150 of file AssociationGraphImplObserver.h.

getLeavesFromNode()

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getLeavesFromNode ( Nref  node, unsigned int  maxDepth  ) const

inlinevirtual

Get the leaves of a graph, ie, nodes with only one neighbor, starting from a peculiar node, with maxDepth recursion depths.

Parameters

node	the starting node
maxDepth	the max recursion depth

Returns

a vector containing the leaves

They are in the same order as the graphIds (and not necessary Indexes).

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1182 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getLeavesFromNode().

getNeighbors() [1/2]

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNeighbors ( const Nref  node ) const

inlinevirtual

Get all the neighbors of a node in the graph.

Parameters

node	the node one wants to get its neighbors

Returns

a vector containing the neighbors

They are in the same order as the graphIds (and not necessary Indexes).

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1073 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNeighbors().

getNeighbors() [2/2]

template<class N, class E, class GraphImpl>

std::vector<NodeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNeighbors ( NodeIndex  node ) const

inlinevirtual

Get the index of all neighbors of a node in the graph.

Parameters

node	the node one wants to get its neighbors

Returns

a vector containing the neighbors

They are in the same order as the graphIds (and not necessary Indexes).

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1085 of file AssociationGraphImplObserver.h.

getNeighbors_()

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNeighbors_ ( const Nref  nodeObject, neighborType  type  ) const

inlineprivate

Get incoming / outgoing neighbors according to the enum type

Definition at line 384 of file AssociationGraphImplObserver.h.

getNode()

template<class N, class E, class GraphImpl>

Nref bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNode ( NodeIndex  node ) const

inlinevirtual

Return the associated Node index

Parameters

node	object which to return the node index

Returns

a node index

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 901 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingNeighbors(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::isLeaf().

getNodeFromGraphid() [1/2]

template<class N, class E, class GraphImpl>

Nref bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNodeFromGraphid ( NodeGraphid  node )

inlinevirtual

Transforms an (a list of) id(s) into an (a list of) object(s)

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 620 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNodes(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getRoot(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getRootIndex(), bpp::AssociationGraphImplObserver< N, E, GraphImpl >::NodeIteratorClass< GraphIterator, is_const >::next(), bpp::AssociationGraphImplObserver< N, E, GraphImpl >::NodeIteratorClass< GraphIterator, is_const >::operator*(), and bpp::AssociationGraphImplObserver< N, E, GraphImpl >::NodeIteratorClass< GraphIterator, is_const >::start().

getNodeFromGraphid() [2/2]

template<class N, class E, class GraphImpl>

const Nref bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNodeFromGraphid ( NodeGraphid  ) const

inlinevirtual

Transforms an (a list of) id(s) into an (a list of) object(s)

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 627 of file AssociationGraphImplObserver.h.

getNodeGraphid()

template<class N, class E, class GraphImpl>

NodeGraphid bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNodeGraphid ( const Nref  nodeObject ) const

inlinevirtual

Return the associated Node ID

Parameters

nodeObject

object which to return the node ID

Returns

a node ID

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 594 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::deleteNode(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getDegree(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdgeLinking(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getEdges_(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getLeavesFromNode(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNeighbors_(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingEdges(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::isLeaf(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::setEdgeLinking(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::setRoot().

getNodeIndex()

template<class N, class E, class GraphImpl>

NodeIndex bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNodeIndex ( const Nref  nodeObject ) const

inlinevirtual

Return the associated Node index

Parameters

nodeObject

object which to return the node index

Returns

a node index

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 728 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getAllInnerNodesIndexes(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getAllLeavesIndexes(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getAllNodesIndexes(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNodeIndexes(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getRootIndex(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::nodeToString(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::outputToDot().

getNodeIndexes() [1/2]

template<class N, class E>

virtual std::vector<NodeIndex> bpp::AssociationGraphObserver< N, E >::getNodeIndexes ( std::vector< std::shared_ptr< N >>  nodeObjects ) const

pure virtualinherited

Referenced by bpp::AssociationGraphObserver< N, E >::copy().

getNodeIndexes() [2/2]

template<class N, class E, class GraphImpl>

std::vector<NodeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNodeIndexes ( std::vector< Nref >  nodes ) const

inline

Definition at line 737 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNeighbors(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingNeighbors().

getNodes()

template<class N, class E, class GraphImpl>

std::pair<Nref, Nref> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNodes ( Eref  edge ) const

inline

Get nodes located at the extremities of an edge

Parameters

edge

an edge

Returns

a pair of the Nodes at each extremity of the edge example : N1–E1–>N2; getNodes(E1) will return (N1,N2);

Definition at line 1437 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::link().

getNodesFromGraphid()

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNodesFromGraphid ( std::vector< NodeGraphid >  nodes ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 634 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getIncomingNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getLeavesFromNode(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNeighbors(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNeighbors_(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingNeighbors().

getNumberOfEdges()

template<class N, class E, class GraphImpl>

size_t bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNumberOfEdges ( ) const

inline

Return the number of defined edges, ie edges that have a corresponding object in this GraphObserver

Returns

the number of edges

Definition at line 1531 of file AssociationGraphImplObserver.h.

getNumberOfLeaves()

template<class N, class E, class GraphImpl>

size_t bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNumberOfLeaves ( ) const

inline

Return the number of defined leaves, ie leaves that have a corresponding object in this GraphObserver

Returns

the number of leaves

Definition at line 1542 of file AssociationGraphImplObserver.h.

getNumberOfNodes()

template<class N, class E, class GraphImpl>

size_t bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getNumberOfNodes ( ) const

inline

Return the number of defined nodes, ie nodes that have a corresponding object in this GraphObserver

Returns

the number of nodes

Definition at line 1521 of file AssociationGraphImplObserver.h.

getOutgoingEdges() [1/2]

template<class N, class E, class GraphImpl>

std::vector<Eref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getOutgoingEdges ( const Nref  node ) const

inlinevirtual

In an directed graph, get all the edges which are leaving a node in the graph.

Parameters

node	the node one wants to get its edges

Returns

a vector containing the outgoing edges

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1129 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingEdges().

getOutgoingEdges() [2/2]

template<class N, class E, class GraphImpl>

std::vector<EdgeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getOutgoingEdges ( NodeIndex  node ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1134 of file AssociationGraphImplObserver.h.

getOutgoingNeighbors() [1/2]

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getOutgoingNeighbors ( const Nref  node ) const

inlinevirtual

In an directed graph, get all the neighbors which are leaving a node in the graph.

Parameters

node	the node one wants to get its neighbors

Returns

a vector containing the outgoing neighbors

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1113 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getOutgoingNeighbors(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::outputToDot().

getOutgoingNeighbors() [2/2]

template<class N, class E, class GraphImpl>

std::vector<NodeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getOutgoingNeighbors ( NodeIndex  node ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1118 of file AssociationGraphImplObserver.h.

getRoot()

template<class N, class E, class GraphImpl>

Nref bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getRoot ( ) const

inlinevirtual

Returns

the root

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 692 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getRoot(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getRootIndex().

getRootIndex()

template<class N, class E, class GraphImpl>

NodeIndex bpp::AssociationGraphImplObserver< N, E, GraphImpl >::getRootIndex ( ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 697 of file AssociationGraphImplObserver.h.

hasEdge() [1/2]

template<class N, class E, class GraphImpl>

bool bpp::AssociationGraphImplObserver< N, E, GraphImpl >::hasEdge ( Eref  edgeObject ) const

inline

Definition at line 337 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::associateEdge(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::edgeToString(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::link(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::setEdgeIndex().

hasEdge() [2/2]

template<class N, class E, class GraphImpl>

bool bpp::AssociationGraphImplObserver< N, E, GraphImpl >::hasEdge ( EdgeIndex  edge ) const

inlinevirtual

Return if has Edge matching EdgeIndex

Parameters

edge	EdgeIndex index

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 891 of file AssociationGraphImplObserver.h.

hasEdgeIndex()

template<class N, class E, class GraphImpl>

bool bpp::AssociationGraphImplObserver< N, E, GraphImpl >::hasEdgeIndex ( const Eref  edgeObject ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 718 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::edgeToString(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::outputToDot().

hasNode() [1/2]

template<class N, class E, class GraphImpl>

bool bpp::AssociationGraphImplObserver< N, E, GraphImpl >::hasNode ( Nref  nodeObject ) const

inline

Definition at line 330 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::associateNode(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::createNode(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::link(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::nodeToString(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::setNodeIndex(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::unlink().

hasNode() [2/2]

template<class N, class E, class GraphImpl>

bool bpp::AssociationGraphImplObserver< N, E, GraphImpl >::hasNode ( NodeIndex  node ) const

inlinevirtual

Return if has Node matching NodeIndex

Parameters

node	NodeIndex index

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 882 of file AssociationGraphImplObserver.h.

hasNodeIndex()

template<class N, class E, class GraphImpl>

bool bpp::AssociationGraphImplObserver< N, E, GraphImpl >::hasNodeIndex ( const Nref  nodeObject ) const

inlinevirtual

return if the object has an index.

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 713 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::nodeToString(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::outputToDot().

incomingEdgesIterator() [1/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::EdgeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::incomingEdgesIterator ( Nref  node )

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1391 of file AssociationGraphImplObserver.h.

incomingEdgesIterator() [2/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::EdgeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::incomingEdgesIterator ( Nref  node ) const

inline

Definition at line 1396 of file AssociationGraphImplObserver.h.

incomingNeighborNodesIterator() [1/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::NodeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::incomingNeighborNodesIterator ( Nref  node )

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1055 of file AssociationGraphImplObserver.h.

incomingNeighborNodesIterator() [2/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::NodeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::incomingNeighborNodesIterator ( Nref  node ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1060 of file AssociationGraphImplObserver.h.

isLeaf() [1/2]

template<class N, class E, class GraphImpl>

bool bpp::AssociationGraphImplObserver< N, E, GraphImpl >::isLeaf ( const Nref  node ) const

inline

Is the node a leaf?

Definition at line 1421 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNumberOfLeaves().

isLeaf() [2/2]

template<class N, class E, class GraphImpl>

bool bpp::AssociationGraphImplObserver< N, E, GraphImpl >::isLeaf ( const NodeIndex  nodeid ) const

inline

Definition at line 1426 of file AssociationGraphImplObserver.h.

link()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::link ( Nref  nodeObjectA, Nref  nodeObjectB, Eref  edgeObject = 00  )

inlinevirtual

Creates a link between two existing nodes. If directed graph: nodeA -> nodeB.

Parameters

nodeObjectA	source node (or first node if undirected)
nodeObjectB	target node (or second node if undirected)
edgeObject	the optional edge between the nodes (default = 00)

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 470 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::createNode().

nodeToString()

template<class N, class E, class GraphImpl>

std::string bpp::AssociationGraphImplObserver< N, E, GraphImpl >::nodeToString ( const Nref  nodeObject ) const

inline

Definition at line 347 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::addNodeIndex(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::associateNode(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::createNode(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getNodeIndex(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::link(), bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::setNodeIndex(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::unlink().

operator=()

template<class N, class E, class GraphImpl>

AssociationGraphImplObserver<N, E, GraphImpl>& bpp::AssociationGraphImplObserver< N, E, GraphImpl >::operator= ( bpp::AssociationGraphImplObserver< N, E, GraphImpl > const &  graphObserver )

inline

= Operator

Parameters

graphObserver

the graphObserver we want to copy the values

Definition at line 255 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationDAGraphImplObserver< N, E, DAGraphImpl >::operator=(), and bpp::AssociationTreeGraphImplObserver< N, E, TreeGraphImpl >::operator=().

outgoingEdgesIterator() [1/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::EdgeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::outgoingEdgesIterator ( Nref  node )

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1377 of file AssociationGraphImplObserver.h.

outgoingEdgesIterator() [2/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::EdgeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::outgoingEdgesIterator ( Nref  node ) const

inline

Definition at line 1382 of file AssociationGraphImplObserver.h.

outgoingNeighborNodesIterator() [1/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::NodeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::outgoingNeighborNodesIterator ( Nref  node )

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1040 of file AssociationGraphImplObserver.h.

outgoingNeighborNodesIterator() [2/2]

template<class N, class E, class GraphImpl>

std::unique_ptr<typename AssociationGraphObserver<N, E>::NodeIterator> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::outgoingNeighborNodesIterator ( Nref  node ) const

inlinevirtual

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1045 of file AssociationGraphImplObserver.h.

outputToDot() [1/2]

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::outputToDot ( const std::string &  fname, const std::string &  name  ) const

inline

Definition at line 935 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::outputToDot().

outputToDot() [2/2]

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::outputToDot ( std::ostream &  out, const std::string &  name  ) const

inline

Definition at line 943 of file AssociationGraphImplObserver.h.

setEdgeIndex()

template<class N, class E, class GraphImpl>

EdgeIndex bpp::AssociationGraphImplObserver< N, E, GraphImpl >::setEdgeIndex ( const Eref  edgeObject, EdgeIndex  index  )

inlinevirtual

Set an index associated to an edge

Parameters

edgeObject	object to which one want to set the index
index	intex to be given, 0 to get the first free index

Returns

the given index

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 798 of file AssociationGraphImplObserver.h.

setEdgeLinking()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::setEdgeLinking ( Nref  nodeA, Nref  nodeB, Eref  edge  )

inlinevirtual

Sets the Edge between two nodes nodeA -> nodeB

Parameters

nodeA	source node (if directed)
nodeB	destination node (if directed)
edge	the edge between these two nodes

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 1460 of file AssociationGraphImplObserver.h.

setNodeIndex()

template<class N, class E, class GraphImpl>

NodeIndex bpp::AssociationGraphImplObserver< N, E, GraphImpl >::setNodeIndex ( const Nref  nodeObject, NodeIndex  index  )

inlinevirtual

Set an index associated to a node

Parameters

nodeObject	object to which one want to set the index
index	index to be given

Returns

the given index

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 774 of file AssociationGraphImplObserver.h.

setRoot()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::setRoot ( const Nref  newRoot )

inline

set the root (but no checking, to be used at first construction)

Definition at line 684 of file AssociationGraphImplObserver.h.

unlink()

template<class N, class E, class GraphImpl>

void bpp::AssociationGraphImplObserver< N, E, GraphImpl >::unlink ( Nref  nodeObjectA, Nref  nodeObjectB  )

inlinevirtual

Deletes the link between two existing nodes in the graph.

Implements bpp::AssociationGraphObserver< N, E >.

Definition at line 497 of file AssociationGraphImplObserver.h.

Friends And Related Function Documentation

AssociationGraphImplObserver

template<class N, class E, class GraphImpl>

template<typename N2 , typename E2 , typename G2 >

friend class AssociationGraphImplObserver

friend

Definition at line 1566 of file AssociationGraphImplObserver.h.

Member Data Documentation

EToGraphid_

template<class N, class E, class GraphImpl>

std::map<Eref, EdgeGraphid> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::EToGraphid_

private

Can find an Edge with the corresponding object.

Definition at line 73 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::AssociationGraphImplObserver(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::operator=().

EToIndex_

template<class N, class E, class GraphImpl>

std::map<Eref, EdgeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::EToIndex_

private

Can find an Edge index with the corresponding object.

Definition at line 103 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::AssociationGraphImplObserver(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::operator=().

graphidToE_

template<class N, class E, class GraphImpl>

std::vector<Eref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::graphidToE_

private

List of edges, stored at the same ID than the corresponding edges in the observed graph.

Definition at line 63 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::operator=().

graphidToN_

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::graphidToN_

private

Registration with Graph Ids. List of nodes, stored at the same ID than the corresponding nodes in the observed graph.

Definition at line 57 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::operator=().

indexToE_

template<class N, class E, class GraphImpl>

std::vector<Eref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::indexToE_

private

List of edges, stored at a given index.

Definition at line 93 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::operator=().

indexToN_

template<class N, class E, class GraphImpl>

std::vector<Nref > bpp::AssociationGraphImplObserver< N, E, GraphImpl >::indexToN_

private

Registration with own Ids (named as index). List of nodes, stored at a given index.

Definition at line 88 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::operator=().

NToGraphid_

template<class N, class E, class GraphImpl>

std::map<Nref, NodeGraphid> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::NToGraphid_

private

Can find a Node with the corresponding object.

Definition at line 68 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::AssociationGraphImplObserver(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::operator=().

NToIndex_

template<class N, class E, class GraphImpl>

std::map<Nref, NodeIndex> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::NToIndex_

private

Can find a Node index with the corresponding object.

Definition at line 98 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::AssociationGraphImplObserver(), and bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::operator=().

subjectGraph_

template<class N, class E, class GraphImpl>

std::shared_ptr<GraphImpl> bpp::AssociationGraphImplObserver< N, E, GraphImpl >::subjectGraph_

protected

The observed Graph. Anytime this graph is observed, the current object will be warned to take changes into account.

Definition at line 44 of file AssociationGraphImplObserver.h.

Referenced by bpp::AssociationGraphImplObserver< N, E, TreeGraphImpl >::getGraph().

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The documentation for this class was generated from the following file:

• Bpp/Graph/AssociationGraphImplObserver.h