bpp-seq3
3.0.0
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This is the complete list of members for bpp::EdSymbolList< T >, including all inherited members.
addCoreSymbolListListener(CoreSymbolListListener< T > *listener) | bpp::EdSymbolList< T > | inlinevirtual |
addElement(const T &v) | bpp::EdSymbolList< T > | inlinevirtual |
addElement(size_t pos, const T &v) | bpp::EdSymbolList< T > | inlinevirtual |
afterSequenceChanged(const CoreSymbolListEditionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
afterSequenceDeleted(const CoreSymbolListDeletionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
afterSequenceInserted(const CoreSymbolListInsertionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
afterSequenceSubstituted(const CoreSymbolListSubstitutionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
alphabet_ | bpp::SymbolList< T > | private |
beforeSequenceChanged(const CoreSymbolListEditionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
beforeSequenceDeleted(const CoreSymbolListDeletionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
beforeSequenceInserted(const CoreSymbolListInsertionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
beforeSequenceSubstituted(const CoreSymbolListSubstitutionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
clone() const | bpp::EdSymbolList< T > | inlineprotectedvirtual |
content_ | bpp::SymbolList< T > | protected |
deleteElement(size_t pos) | bpp::EdSymbolList< T > | inlinevirtual |
deleteElements(size_t pos, size_t len) | bpp::EdSymbolList< T > | inlinevirtual |
EdSymbolList(const Alphabet *alpha) | bpp::EdSymbolList< T > | inlineprotected |
EdSymbolList(const std::vector< T > &list, const Alphabet *alpha) | bpp::EdSymbolList< T > | inlineprotected |
EdSymbolList(const CoreSymbolList< T > &list) | bpp::EdSymbolList< T > | inlineprotected |
EdSymbolList(const EdSymbolList< T > &list) | bpp::EdSymbolList< T > | inlineprotected |
fireAfterSequenceChanged(const CoreSymbolListEditionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
fireAfterSequenceDeleted(const CoreSymbolListDeletionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
fireAfterSequenceInserted(const CoreSymbolListInsertionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
fireAfterSequenceSubstituted(const CoreSymbolListSubstitutionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
fireBeforeSequenceChanged(const CoreSymbolListEditionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
fireBeforeSequenceDeleted(const CoreSymbolListDeletionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
fireBeforeSequenceInserted(const CoreSymbolListInsertionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
fireBeforeSequenceSubstituted(const CoreSymbolListSubstitutionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
getAlphabet() const | bpp::SymbolList< T > | inlinevirtual |
getContent() const | bpp::SymbolList< T > | inlinevirtual |
getElement(size_t pos) const | bpp::SymbolList< T > | inlinevirtual |
getListener(size_t i) const | bpp::EdSymbolList< T > | inlinevirtual |
getListener(size_t i) | bpp::EdSymbolList< T > | inlinevirtual |
getNumberOfListeners() const | bpp::EdSymbolList< T > | inlinevirtual |
bpp::getStateValueAt(size_t siteIndex, int state) const | bpp::CruxSymbolList | inlinevirtual |
bpp::EdCoreSymbolList::getStateValueAt(size_t siteIndex, int state) const | bpp::EdCoreSymbolList< T > | inlinevirtual |
getValue(size_t pos) const | bpp::SymbolList< T > | inlinevirtual |
listeners_ | bpp::EdSymbolList< T > | protected |
bpp::operator()(size_t siteIndex, int state) const | bpp::CruxSymbolList | inlinevirtual |
bpp::EdCoreSymbolList::operator()(size_t siteIndex, int state) const | bpp::EdCoreSymbolList< T > | inlinevirtual |
operator=(const CoreSymbolList< T > &list) | bpp::EdSymbolList< T > | inlineprotected |
operator=(const EdSymbolList &list) | bpp::EdSymbolList< T > | inlineprotected |
bpp::SymbolList::operator=(const SymbolList< T > &list) | bpp::SymbolList< T > | inline |
operator[](size_t pos) const | bpp::SymbolList< T > | inlinevirtual |
operator[](size_t pos) | bpp::SymbolList< T > | inlinevirtual |
propagateEvents(bool yn) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
propagateEvents() const | bpp::EdSymbolList< T > | inlineprotectedvirtual |
propagateEvents_ | bpp::EdSymbolList< T > | private |
removeCoreSymbolListListener(CoreSymbolListListener< T > *listener) | bpp::EdSymbolList< T > | inlinevirtual |
setContent(const std::vector< T > &list) | bpp::EdSymbolList< T > | inlinevirtual |
setElement(size_t pos, const T &v) | bpp::EdSymbolList< T > | inlinevirtual |
shuffle() | bpp::SymbolList< T > | inlinevirtual |
size() const | bpp::SymbolList< T > | inlinevirtual |
SymbolList(const Alphabet *alpha) | bpp::SymbolList< T > | inline |
SymbolList(const std::vector< T > &list, const Alphabet *alpha) | bpp::SymbolList< T > | inline |
SymbolList(const SymbolList< T > &list) | bpp::SymbolList< T > | inline |
SymbolList(const CoreSymbolList< T > &list) | bpp::SymbolList< T > | inline |
toString() const | bpp::SymbolList< T > | inlinevirtual |
~Clonable()=default | bpp::Clonable | virtual |
~CoreSymbolList() | bpp::CoreSymbolList< T > | inlinevirtual |
~CruxSymbolList() | bpp::CruxSymbolList | inlinevirtual |
~EdCoreSymbolList() | bpp::EdCoreSymbolList< T > | inlinevirtual |
~EdSymbolList() | bpp::EdSymbolList< T > | inlineprotectedvirtual |
~SymbolList() | bpp::SymbolList< T > | inlinevirtual |