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bpp-seq3
3.0.0
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This is the complete list of members for bpp::EdSymbolList< T >, including all inherited members.
| addCoreSymbolListListener(CoreSymbolListListener< T > *listener) | bpp::EdSymbolList< T > | inlinevirtual |
| addElement(const T &v) | bpp::EdSymbolList< T > | inlinevirtual |
| addElement(size_t pos, const T &v) | bpp::EdSymbolList< T > | inlinevirtual |
| afterSequenceChanged(const CoreSymbolListEditionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| afterSequenceDeleted(const CoreSymbolListDeletionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| afterSequenceInserted(const CoreSymbolListInsertionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| afterSequenceSubstituted(const CoreSymbolListSubstitutionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| alphabet_ | bpp::SymbolList< T > | private |
| beforeSequenceChanged(const CoreSymbolListEditionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| beforeSequenceDeleted(const CoreSymbolListDeletionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| beforeSequenceInserted(const CoreSymbolListInsertionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| beforeSequenceSubstituted(const CoreSymbolListSubstitutionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| clone() const | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| content_ | bpp::SymbolList< T > | protected |
| deleteElement(size_t pos) | bpp::EdSymbolList< T > | inlinevirtual |
| deleteElements(size_t pos, size_t len) | bpp::EdSymbolList< T > | inlinevirtual |
| EdSymbolList(const Alphabet *alpha) | bpp::EdSymbolList< T > | inlineprotected |
| EdSymbolList(const std::vector< T > &list, const Alphabet *alpha) | bpp::EdSymbolList< T > | inlineprotected |
| EdSymbolList(const CoreSymbolList< T > &list) | bpp::EdSymbolList< T > | inlineprotected |
| EdSymbolList(const EdSymbolList< T > &list) | bpp::EdSymbolList< T > | inlineprotected |
| fireAfterSequenceChanged(const CoreSymbolListEditionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| fireAfterSequenceDeleted(const CoreSymbolListDeletionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| fireAfterSequenceInserted(const CoreSymbolListInsertionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| fireAfterSequenceSubstituted(const CoreSymbolListSubstitutionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| fireBeforeSequenceChanged(const CoreSymbolListEditionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| fireBeforeSequenceDeleted(const CoreSymbolListDeletionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| fireBeforeSequenceInserted(const CoreSymbolListInsertionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| fireBeforeSequenceSubstituted(const CoreSymbolListSubstitutionEvent< T > &event) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| getAlphabet() const | bpp::SymbolList< T > | inlinevirtual |
| getContent() const | bpp::SymbolList< T > | inlinevirtual |
| getElement(size_t pos) const | bpp::SymbolList< T > | inlinevirtual |
| getListener(size_t i) const | bpp::EdSymbolList< T > | inlinevirtual |
| getListener(size_t i) | bpp::EdSymbolList< T > | inlinevirtual |
| getNumberOfListeners() const | bpp::EdSymbolList< T > | inlinevirtual |
| bpp::getStateValueAt(size_t siteIndex, int state) const | bpp::CruxSymbolList | inlinevirtual |
| bpp::EdCoreSymbolList::getStateValueAt(size_t siteIndex, int state) const | bpp::EdCoreSymbolList< T > | inlinevirtual |
| getValue(size_t pos) const | bpp::SymbolList< T > | inlinevirtual |
| listeners_ | bpp::EdSymbolList< T > | protected |
| bpp::operator()(size_t siteIndex, int state) const | bpp::CruxSymbolList | inlinevirtual |
| bpp::EdCoreSymbolList::operator()(size_t siteIndex, int state) const | bpp::EdCoreSymbolList< T > | inlinevirtual |
| operator=(const CoreSymbolList< T > &list) | bpp::EdSymbolList< T > | inlineprotected |
| operator=(const EdSymbolList &list) | bpp::EdSymbolList< T > | inlineprotected |
| bpp::SymbolList::operator=(const SymbolList< T > &list) | bpp::SymbolList< T > | inline |
| operator[](size_t pos) const | bpp::SymbolList< T > | inlinevirtual |
| operator[](size_t pos) | bpp::SymbolList< T > | inlinevirtual |
| propagateEvents(bool yn) | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| propagateEvents() const | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| propagateEvents_ | bpp::EdSymbolList< T > | private |
| removeCoreSymbolListListener(CoreSymbolListListener< T > *listener) | bpp::EdSymbolList< T > | inlinevirtual |
| setContent(const std::vector< T > &list) | bpp::EdSymbolList< T > | inlinevirtual |
| setElement(size_t pos, const T &v) | bpp::EdSymbolList< T > | inlinevirtual |
| shuffle() | bpp::SymbolList< T > | inlinevirtual |
| size() const | bpp::SymbolList< T > | inlinevirtual |
| SymbolList(const Alphabet *alpha) | bpp::SymbolList< T > | inline |
| SymbolList(const std::vector< T > &list, const Alphabet *alpha) | bpp::SymbolList< T > | inline |
| SymbolList(const SymbolList< T > &list) | bpp::SymbolList< T > | inline |
| SymbolList(const CoreSymbolList< T > &list) | bpp::SymbolList< T > | inline |
| toString() const | bpp::SymbolList< T > | inlinevirtual |
| ~Clonable()=default | bpp::Clonable | virtual |
| ~CoreSymbolList() | bpp::CoreSymbolList< T > | inlinevirtual |
| ~CruxSymbolList() | bpp::CruxSymbolList | inlinevirtual |
| ~EdCoreSymbolList() | bpp::EdCoreSymbolList< T > | inlinevirtual |
| ~EdSymbolList() | bpp::EdSymbolList< T > | inlineprotectedvirtual |
| ~SymbolList() | bpp::SymbolList< T > | inlinevirtual |