bpp::LegacyMarginalAncestralStateReconstruction Member List

This is the complete list of members for bpp::LegacyMarginalAncestralStateReconstruction, including all inherited members.

alphabet_	bpp::LegacyMarginalAncestralStateReconstruction	private
clone() const	bpp::LegacyMarginalAncestralStateReconstruction	inline
getAllAncestralStates() const override	bpp::LegacyMarginalAncestralStateReconstruction	virtual
getAncestralSequenceForNode(int nodeId, VVdouble *probs, bool sample) const	bpp::LegacyMarginalAncestralStateReconstruction
getAncestralSequenceForNode(int nodeId) const override	bpp::LegacyMarginalAncestralStateReconstruction	inlinevirtual
getAncestralSequences() const override	bpp::LegacyMarginalAncestralStateReconstruction	inlinevirtual
getAncestralSequences(bool sample) const	bpp::LegacyMarginalAncestralStateReconstruction
getAncestralStatesForNode(int nodeId, VVdouble &probs, bool sample) const	bpp::LegacyMarginalAncestralStateReconstruction
getAncestralStatesForNode(int nodeId) const override	bpp::LegacyMarginalAncestralStateReconstruction	inlinevirtual
l_	bpp::LegacyMarginalAncestralStateReconstruction	private
LegacyAncestralStateReconstruction()	bpp::LegacyAncestralStateReconstruction	inline
LegacyMarginalAncestralStateReconstruction(std::shared_ptr< const DRTreeLikelihoodInterface > drl)	bpp::LegacyMarginalAncestralStateReconstruction	inline
LegacyMarginalAncestralStateReconstruction(const LegacyMarginalAncestralStateReconstruction &masr)=default	bpp::LegacyMarginalAncestralStateReconstruction
likelihood_	bpp::LegacyMarginalAncestralStateReconstruction	private
nbClasses_	bpp::LegacyMarginalAncestralStateReconstruction	private
nbDistinctSites_	bpp::LegacyMarginalAncestralStateReconstruction	private
nbSites_	bpp::LegacyMarginalAncestralStateReconstruction	private
nbStates_	bpp::LegacyMarginalAncestralStateReconstruction	private
operator=(const LegacyMarginalAncestralStateReconstruction &masr)=default	bpp::LegacyMarginalAncestralStateReconstruction
r_	bpp::LegacyMarginalAncestralStateReconstruction	private
recursiveMarginalAncestralStates(const Node *node, std::map< int, std::vector< size_t >> &ancestors, AlignedSequenceContainer &data) const	bpp::LegacyMarginalAncestralStateReconstruction	private
rootPatternLinks_	bpp::LegacyMarginalAncestralStateReconstruction	private
tree_	bpp::LegacyMarginalAncestralStateReconstruction	private
~LegacyAncestralStateReconstruction()	bpp::LegacyAncestralStateReconstruction	inlinevirtual
~LegacyMarginalAncestralStateReconstruction()	bpp::LegacyMarginalAncestralStateReconstruction	inlinevirtual