bpp-phyl3  3.0.0
bpp::Reward Member List

This is the complete list of members for bpp::Reward, including all inherited members.

clone() const =0bpp::Rewardpure virtual
getAllRewards(double length) const =0bpp::Rewardpure virtual
getAlphabet() constbpp::Rewardinlinevirtual
getAlphabetIndex() const =0bpp::Rewardpure virtual
getNumberOfStates() constbpp::Rewardinlinevirtual
getReward(size_t initialState, size_t finalState, double length) const =0bpp::Rewardpure virtual
hasAlphabetIndex() const =0bpp::Rewardpure virtual
Reward()bpp::Rewardinline
setAlphabetIndex(std::shared_ptr< const AlphabetIndex1 > alphind)=0bpp::Rewardpure virtual
setSubstitutionModel(std::shared_ptr< const SubstitutionModelInterface > model)=0bpp::Rewardpure virtual
storeAllRewards(double length, Eigen::MatrixXd &mat) const =0bpp::Rewardpure virtual
~Clonable()=defaultbpp::Clonablevirtual
~Reward()bpp::Rewardinlinevirtual