BackwardLikelihoodTree.h File Reference
#include "Bpp/Phyl/Likelihood/DataFlow/ForwardLikelihoodTree.h"#include "Bpp/Phyl/Likelihood/DataFlow/Model.h"#include "Bpp/Phyl/Likelihood/DataFlow/ProcessTree.h"
Include dependency graph for BackwardLikelihoodTree.h:
This graph shows which files directly or indirectly include this file:
Go to the source code of this file.
Classes | |
| class | bpp::BackwardLikelihoodTree |
Namespaces | |
| bpp | |
| Defines the basic types of data flow nodes. | |
Typedefs | |
| using | bpp::SpeciationBackward = CWiseMul< MatrixLik, ReductionOf< MatrixLik > > |
| : At the top of each edge below a speciation node More... | |
| using | bpp::MixtureBackward = CWiseAdd< MatrixLik, ReductionOf< MatrixLik > > |
| : At the top of each edge below a mixture node More... | |
| using | bpp::BackwardTransition = MatrixProduct< MatrixLik, Transposed< Eigen::MatrixXd >, MatrixLik > |
| : Above each node : bottom of an edge in case of transition from upper More... | |
| using | bpp::BackwardProportion = CWiseMul< MatrixLik, std::tuple< double, MatrixLik > > |
| : Above each node : in case of mixture of above edges More... | |
| using | bpp::ConditionalLikelihood = Value< MatrixLik > |
| using | bpp::ConditionalLikelihoodRef = ValueRef< MatrixLik > |
| using | bpp::BackwardLikelihoodAbove = Value< MatrixLik > |
| using | bpp::BackwardLikelihoodAboveRef = ValueRef< MatrixLik > |
