#include "../FrequencySet/CodonFrequencySet.h"
#include "../Protein/ProteinSubstitutionModel.h"
#include "CodonSubstitutionModel.h"
#include <Bpp/Seq/GeneticCode/GeneticCode.h>
#include <Bpp/Seq/AlphabetIndex/AlphabetIndex2.h>

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Classes
class	bpp::CodonSameAARateSubstitutionModel
	Class for modelling of non-synonymous rates in codon models, such that the substitution rates between amino acids are similar to the ones in an amino acid rate matrix (from a shared_ptr model). More...

Namespaces
	bpp
	Defines the basic types of data flow nodes.

Classes

Namespaces