bpp::NexusIOTree Member List

This is the complete list of members for bpp::NexusIOTree, including all inherited members.

AbstractIMultiPhyloTree()	bpp::AbstractIMultiPhyloTree	inline
AbstractIMultiTree()	bpp::AbstractIMultiTree	inline
AbstractIPhyloTree()	bpp::AbstractIPhyloTree	inline
AbstractITree()	bpp::AbstractITree	inline
AbstractOMultiPhyloTree()	bpp::AbstractOMultiPhyloTree	inline
AbstractOMultiTree()	bpp::AbstractOMultiTree	inline
AbstractOPhyloTree()	bpp::AbstractOPhyloTree	inline
AbstractOTree()	bpp::AbstractOTree	inline
getDataType() const	bpp::IOTree	inlinevirtual
bpp::getElement(const std::string &elt) const	bpp::AbstractITree	inlinevirtual
bpp::AbstractIPhyloTree::getElement(const std::string &elt) const	bpp::AbstractIPhyloTree	inline
getFormatDescription() const override	bpp::NexusIOTree	virtual
getFormatName() const override	bpp::NexusIOTree	virtual
IMultiPhyloTree()	bpp::IMultiPhyloTree	inline
IMultiTree()	bpp::IMultiTree	inline
IOFormat()	bpp::IOFormat
IOTree()	bpp::IOTree	inline
IPhyloTree()	bpp::IPhyloTree	inline
ITree()	bpp::ITree	inline
NexusIOTree()	bpp::NexusIOTree	inline
OMultiPhyloTree()	bpp::OMultiPhyloTree	inline
OMultiTree()	bpp::OMultiTree	inline
OPhyloTree()	bpp::OPhyloTree	inline
OTree()	bpp::OTree	inline
readPhyloTree(std::istream &in) const override	bpp::NexusIOTree	virtual
readPhyloTree(std::istream &in) const override=0	bpp::NexusIOTree	virtual
readPhyloTree(const std::string &path) const override	bpp::NexusIOTree	inlinevirtual
readPhyloTrees(std::istream &in, std::vector< std::unique_ptr< PhyloTree > > &trees) const override	bpp::NexusIOTree	virtual
readPhyloTrees(std::istream &in, std::vector< std::unique_ptr< PhyloTree > > &trees) const override=0	bpp::NexusIOTree	virtual
readPhyloTrees(const std::string &path, std::vector< std::unique_ptr< PhyloTree > > &trees) const override	bpp::NexusIOTree	inlinevirtual
readTree(std::istream &in) const override	bpp::AbstractITree	inlinevirtual
readTree(const std::string &path) const override	bpp::AbstractITree	inlinevirtual
readTrees(std::istream &in, std::vector< std::unique_ptr< Tree > > &trees) const override	bpp::NexusIOTree	virtual
readTrees(std::istream &in, std::vector< std::unique_ptr< Tree > > &trees) const override=0	bpp::NexusIOTree	virtual
readTrees(const std::string &path, std::vector< std::unique_ptr< Tree > > &trees) const override	bpp::NexusIOTree	inlinevirtual
readTreeTemplate(std::istream &in) const override	bpp::NexusIOTree	virtual
readTreeTemplate(std::istream &in) const=0	bpp::NexusIOTree	virtual
readTreeTemplate(const std::string &path) const	bpp::NexusIOTree	inlinevirtual
write_(const Tree &tree, std::ostream &out) const	bpp::NexusIOTree	protected
write_(const PhyloTree &tree, std::ostream &out) const	bpp::NexusIOTree	protected
write_(const TreeTemplate< N > &tree, std::ostream &out) const	bpp::NexusIOTree	protected
write_(const std::vector< const Tree * > &trees, std::ostream &out) const	bpp::NexusIOTree	protected
write_(const std::vector< const PhyloTree * > &trees, std::ostream &out) const	bpp::NexusIOTree	protected
write_(const std::vector< TreeTemplate< N > * > &trees, std::ostream &out) const	bpp::NexusIOTree	protected
writePhyloTree(const PhyloTree &tree, std::ostream &out) const override	bpp::NexusIOTree	inlinevirtual
writePhyloTree(const PhyloTree &tree, std::ostream &out) const=0	bpp::NexusIOTree	virtual
writePhyloTree(const PhyloTree &tree, const std::string &path, bool overwrite) const	bpp::NexusIOTree	inlinevirtual
writePhyloTrees(const std::vector< const PhyloTree * > &trees, std::ostream &out) const override	bpp::NexusIOTree	inlinevirtual
writePhyloTrees(const std::vector< const PhyloTree * > &trees, std::ostream &out) const=0	bpp::NexusIOTree	virtual
writePhyloTrees(const std::vector< const PhyloTree * > &trees, const std::string &path, bool overwrite) const	bpp::NexusIOTree	inlinevirtual
writeTree(const Tree &tree, std::ostream &out) const override	bpp::NexusIOTree	inlinevirtual
writeTree(const Tree &tree, std::ostream &out) const=0	bpp::NexusIOTree	virtual
writeTree(const Tree &tree, const std::string &path, bool overwrite) const	bpp::NexusIOTree	inlinevirtual
writeTrees(const std::vector< const Tree * > &trees, std::ostream &out) const override	bpp::NexusIOTree	inlinevirtual
writeTrees(const std::vector< const Tree * > &trees, std::ostream &out) const=0	bpp::NexusIOTree	virtual
writeTrees(const std::vector< const Tree * > &trees, const std::string &path, bool overwrite) const	bpp::NexusIOTree	inlinevirtual
~AbstractIMultiPhyloTree()	bpp::AbstractIMultiPhyloTree	inlinevirtual
~AbstractIMultiTree()	bpp::AbstractIMultiTree	inlinevirtual
~AbstractIPhyloTree()	bpp::AbstractIPhyloTree	inlinevirtual
~AbstractITree()	bpp::AbstractITree	inlinevirtual
~AbstractOMultiPhyloTree()	bpp::AbstractOMultiPhyloTree	inlinevirtual
~AbstractOMultiTree()	bpp::AbstractOMultiTree	inlinevirtual
~AbstractOPhyloTree()	bpp::AbstractOPhyloTree	inlinevirtual
~AbstractOTree()	bpp::AbstractOTree	inlinevirtual
~IMultiPhyloTree()	bpp::IMultiPhyloTree	inlinevirtual
~IMultiTree()	bpp::IMultiTree	inlinevirtual
~IOFormat()	bpp::IOFormat	virtual
~IOTree()	bpp::IOTree	inlinevirtual
~IPhyloTree()	bpp::IPhyloTree	inlinevirtual
~ITree()	bpp::ITree	inlinevirtual
~NexusIOTree()	bpp::NexusIOTree	inlinevirtual
~OMultiPhyloTree()	bpp::OMultiPhyloTree	inlinevirtual
~OMultiTree()	bpp::OMultiTree	inlinevirtual
~OPhyloTree()	bpp::OPhyloTree	inlinevirtual
~OTree()	bpp::OTree	inlinevirtual