bpp::TrivialSitePartition Class Reference

Trivial site partition: all sites belong to the same, unique partition. More...

#include <Bpp/Phyl/Likelihood/SitePartition.h>

Inheritance diagram for bpp::TrivialSitePartition:

Collaboration diagram for bpp::TrivialSitePartition:

Public Member Functions
	TrivialSitePartition (size_t nbDistinctSites)
TrivialSitePartition *	clone () const
size_t	getNumberOfPartitions () const
size_t	getNumberOfPatternsForPartition (size_t partitionIndex) const

Private Attributes
size_t	nbDistinctSites_

Detailed Description

Trivial site partition: all sites belong to the same, unique partition.

Definition at line 34 of file SitePartition.h.

Constructor & Destructor Documentation

TrivialSitePartition()

bpp::TrivialSitePartition::TrivialSitePartition ( size_t  nbDistinctSites )

inline

Definition at line 41 of file SitePartition.h.

Referenced by clone().

Member Function Documentation

clone()

TrivialSitePartition* bpp::TrivialSitePartition::clone ( ) const

inlinevirtual

Implements bpp::SitePartition.

Definition at line 43 of file SitePartition.h.

References TrivialSitePartition().

getNumberOfPartitions()

size_t bpp::TrivialSitePartition::getNumberOfPartitions ( ) const

inlinevirtual

Implements bpp::SitePartition.

Definition at line 46 of file SitePartition.h.

getNumberOfPatternsForPartition()

size_t bpp::TrivialSitePartition::getNumberOfPatternsForPartition ( size_t  partitionIndex ) const

inlinevirtual

Implements bpp::SitePartition.

Definition at line 47 of file SitePartition.h.

References nbDistinctSites_.

Member Data Documentation

nbDistinctSites_

size_t bpp::TrivialSitePartition::nbDistinctSites_

private

Definition at line 38 of file SitePartition.h.

Referenced by getNumberOfPatternsForPartition().

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The documentation for this class was generated from the following file:

• Bpp/Phyl/Likelihood/SitePartition.h